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Pathway Analysis

Pathway analysis links the sequences of a functional annotation project to biological pathways, giving an overview of the biological mechanisms present in the dataset and summarising the results in a way that eases their interpretation.

From the project Side Panel, this option launches the Combined Pathway Analysis tool, which identifies Reactome, Gramene, and KEGG pathways for the sequences and, optionally, tests them for enrichment using differential expression data.

The full input, configuration, results table, and pathway viewer are documented on the Combined Pathway Analysis page.